NIST 11 GC Method / Retention Index Database

NIST 11 GC Method / Retention Index Database provides retention index data and gas chromatographic conditions for 70,835 compounds on polar and nonpolar stationary phases used with packed and open tubular columns. There are a total of 346,757 data points (index values and GC methods). Each citation contains the complete bibliographical information including the title. Details of the gas chromatographic method used to obtain the retention index are also provided. The 38,648 compounds with spectra in the NIST/EPA/NIH Mass Spectral Database (NIST08) are noted.

Many of the compounds are provided with alternate names (Synonyms). All the compounds are represented by elemental composition (Formula), nominal mass (MW), Chemical Abstracts Services registry number (CAS rn, when available), and a accession number for the species in the NIST GC Retention Index Database (ID#).

Example of the Results of a Name Search
Text Numbers
Number of Compounds 70,835
Total Data Points 346,757
Compounds with Spectra 38,648

Example of the results of a Name Search showing the type of information provided for each search result

In addition, estimated nonpolar retention index values (n-alkane series Kovats indices), derived from the structure, are provided for each compound. To better understand how these values are calculated and how structures are searched against the structures of the compounds in the RI Database, please see the citations below.

Data can be retrieved through an incremental name search (including many synonyms), a CAS rn search, a MW search, a formula search, or a structure search. In addition, the Database can be searched by multiple variables (including name fragments of main compound names and synonyms) that can be used to constrain the above-mentioned searches. A search can be performed over a molecular weight (nominal mass) range. A search can be constrained to the elements present and/or the number of each element present. Searches can be constrained for name fragments present in the main database name and in the synonym list. The display of search results for individual hits can also be constrained according to column type (packed or capillary), stationary-phase type (polar or nonpolar), GC temperature conditions (isothermal or temperature programmed), and/or retention index type (Lee or Kovats). The Database can also be searched by a range of RI values, with additional constraints if desired. When structure searches are preformed, the structure search can be constrained by a range of RI values. When a structure is submitted to the program for searching, an estimated RI value is calculated for it.

The Program's Desktop has three tab-activated Windows, each Window having its own specific functions: Names Window (where searches by compound name (main database name) or synonym are carried out); Other Search Window (which is used for Formula, CAS rn, MW, RI or the Sequential Method searches); and the Structure Search Window (where a list of compounds is produced that have a similar structure to a submitted structure).

The general features of all Windows are described in detail in the Program's interactive Help file. At the top of the display of each Window is the Title Bar. On the left side of the Title Bar appears the name of the Program; i.e., NIST RI Search followed by information that is presented in brackets ( [ … ] ). The words [Name search] appear at the top of the Names Window. The type of search, search variable, and the number of hits appear at the top of the Other Search Window; i.e., [Formula: C6H6, 7 compounds], [Constrained MW: 25, 177 compounds] or [CAS number: 10448267, 1 compound]. The phrase “Structure Similarity Search” followed by the number of hits will be displayed at the top of the Structure Search Window; i.e., [Structure Similarity Search – 400 compounds]. Each Window also has a number of windows that are used for the display of structures of individual compounds, text information about those individual compounds, or list of names of compounds in either a text or text/structure style.

There are a number of controls for the windows, some are specific to each window type and some are general for all the windows. The Right Mouse button menu has many functions. It is context-specific, but there are some general features that are common to all of the windows.

The Program and its RI Database have many different uses in areas such as:

GC method development: You can find a suggested method for a compound in the Database or for a compound that has a structure similar to a compound in the Database.

Assistance in the identification of a compound responsible for an unknown chromatographic peak in a GC or a GC/MS analysis: If a chromatographic peak appears between peaks representing two known compounds, look up the RI values for those known compounds and do an RI Search over the RI range to see if there is a candidate for the unknown; or, in the case of regioisomers, which isomer elutes in what order.

The number of uses is limited only by your imagination.

Citations

  1. Babushok, V.I.; Linstrom, P.J.; Reed, J.J.; Zenkevich, I.G.; Brown, R.L.; Mallard, W.G.; Stein, S.E. “Development of a database of gas chromatographic retention properties of organic compounds” J. Chromatogr. A, 2007, 1157, 414–421.
  2. Stein, S.E.; Babushok, V.I.; Brown, R.L.; Linstrom, P.J. “Estimation of Kovats retention indices using group contributions” J. Chem. Inf. Modeling, 2007, 47, 975–980.

The RI Database and Search Program is available from the following distributors:

ALPHA-MOS
20 avenue Didier Daurat
Immeuble St Exupery
31400 Toulouse France
Phone: 33 562 475380
Fax: 33 561 545615
Business Contact: Dr. Hicham Amine – amine@alpha-mos.com
Web Site: www.alpha-mos.com

Analytics Consulting
Parc Lubonis Bat 22
06000 Nice
Phone: 33 (0)4 93 53 49 89
Fax: 33 (0)4 93 53 41 64
support@analytics-consulting.fr
jfantinelli@analytics-consulting.fr

ARLS Inc
3480 Tanbark Ct NE
Atlanta GA 30319
Phone: (404) 255-4817
Business Contact: Bob Adams – raadams59@gmail.com

Axel Semrau GmbH & Co KG
Stefansbecke 42
45549 Sprockhovel
Phone: 02339-1209-46
Fax: 02339-6030
Business Contact: Dr. Andreaws Bruchmann – bruchmann@axelsemrau.de
Web Site: www.axel-semrau.de/Start.html

ChemSW, Inc.
4771 Mangels Blvd
Fairfield, CA 94534
Phone: (707) 864-0845
Fax: (707) 864-2815
Business Contact: Megan Bailey – info@chemsw.com
Web Site: www.chemsw.com

Fiveash Data Management Inc.
211 Vista Rd
Madison, WI 53726
Phone: (608) 236-9145
Fax: (608) 236-9170
Business Contact: William Costa – fdm@fdmspectra.com
Web Site: www.fdmspectra.com

GC Image, LLC
PO Box 57403
Lincoln, NE 68505-7403
Phone: (402) 310-4503
Fax: (402) 436-2660
Business Contact: info@gcimage.com
Web Site: www.gcimage.com
NIST11 Web Site: www.gcimage.com/nistlib.html

Geneva Bioinformatics (GeneBio) S.A.
25 Avenue de Champel
CH-1206 Geneva. Switzerland
Scientific Contact: Dr. Alexandre Masselot – alexandre.masselot@genebio.com
Commercial Contact: Mr. Olivier Philippe – olivier.philippe@genebio.com
Web Site: www.genebio.com

Japan Association for International Chemical Information (JAICI)
Nakai Bldg.
6-25-4 Honkomagome
Bunkyo-ku Tokyo 113-0021 Japan
Phone: 03-5978-3622 (in Japan)
Fax: 03-5978-3600 (in Japan)
Business Contact: crystal@jaici.or.jp
Web Site: www.jaici.or.jp
John Wiley and Sons
111 River St.
Hoboken NJ 07030-5723
Phone: (201) 748-8691
Fax: (201) 748-8888
Business Contact: Graeme Whitley – gwhitley@wiley.com
Web Site : www.wiley.com/go/databases

Joint Analytical Systems Benelux BV
Beemdstraat 17A
5653 MA Eindhoven
Phone: 0031-(0)-40 25 14 753
Fax: 0031-(0)-40 25 14 758
Business Contact: Marco Koenen – marco.koenen@jasbenelux.com
Web Site: www.jasbenelux.com

Konik-Tech
Av. Cerdanyola, 73
08190 – Sant Cugat – Barcelona – Spain
Phone: (34) 935902840
Fax: (34) 935902844
Business Contact: Ariadna Galve – ariadna.galve@konik-group.com
Web Site: www.konik-group.com

MSP KOFEL
Industriestrasse 26
CH-3052 Zollikofen
Switzerland
Phone: 41 (0) 31 972 31 52
Fax: 41 (0) 31 971 46 43
Business Contact: Peter Kofel – info@msp.ch
web Site: www.msp.ch

Scientific Instrument Services
1027 Old York Rd
Ringoes, NJ 08551
Phone: (908) 788-5550 ext. 800
Fax: (908) 806-6631
Business Contact: David Manura – jma@sisweb.com
SIS Web Site: www.sisweb.com
Machining Web Site: www.scientificmachining.com
SIMION Web Site: www.simion.com

Shrader Laboratories
440 Burroughs Street Suite 340
Detroit MI 48202-4489
Phone: (313) 894-4440
Fax: (313) 894-4489
Business Contact: Steve Shrader – sacli@mail.msen.com

Stanton Scientific
Mail Address: P.O. Box 928
Deliveries: 2/75 Jonson St.
Byron Bay NSW 2481 Australia
Phone: (02) 668 56902
Fax: (02) 856 90588
Business Contact: William Stanton – bill@stantonscientific.com
Web Site: www.stantonscientific.com

Thermo Fisher Scientific
Informatics Global Partner Alliance
5318 North Lakewood Avenue
Chicago, IL 60640-2209
Phone: (773) 334-8268
Fax: (773) 334-8469
Cell: (773) 456-7562
Business Contact: Stephen C. Best – steve.best@thermofisher.com
Web Site: www.thermo.com

Waters Corp
Floats Road
Wythenshawe, Manchester, M23 9LE UK
United Kindom
Phone: 44 (0) 161 945 4170
Business Contact: Joy_Robinson@waters.com
Technical Contact: Jeff Goshwak – jeff_goshawk@waters.com