====== Human Ion Trap Library  ======
=====  May 29, 2014 =====

This library was assembled from data contributed by many laboratories.  Each library entry contains annotation specifying its origin.  Additionally, a summary table of the many contributors to this library, including references, can be downloaded [[https://chemdata.nist.gov/download/peptide_library/libraries/human/ION_TRAP/2014_05_29/human_it_annotation_lib2014.xlsx|here]] (Excel file).

{{page>newfiles_warning}}

<WRAP center group 80%>
^ File - Description ^ Size ^ Link ^
| **2014_05_29_human_consensus_final_true_lib.tar.gz** - Consensus library in plain ASCII text (msp format). This format can be used as an exchange format. It is also directly readable by some software applications, like Skyline, after unzipping. |  694MB| [[https://chemdata.nist.gov/download/peptide_library/libraries/human/ION_TRAP/2014_05_29/2014_05_29_human_consensus_final_true_lib.tar.gz|Download]] |
| **2014_05_29_human_nist.tar.gz** - Consensus library in NIST binary format. The folder generated by extracting this package can be used directly by [[peptidew:mspepsearch|MS Search or MSPepSearch]] and by the MSPepSearch node within Proteome Discoverer. |  1.3GB| [[https://chemdata.nist.gov/download/peptide_library/libraries/human/ION_TRAP/2014_05_29/2014_05_29_human_nist.tar.gz|Download]] | 
| **2014_05_29_human_spectrast.tar.gz** - Consensus library in SpectraST format.  These library files can be directly searched by SpectraST after the package is extracted. |  1.6GB| [[https://chemdata.nist.gov/download/peptide_library/libraries/human/ION_TRAP/2014_05_29/2014_05_29_human_spectrast.tar.gz|Download]] |
| **human_fasta.tar.gz** - FASTA file used to create the library. |  15MB| [[https://chemdata.nist.gov/download/peptide_library/libraries/human/ION_TRAP/2014_05_29/human_fasta.tar.gz|Download]] | 
| **md5_checklist.chk** - MD5 hash file. |  1KB| [[https://chemdata.nist.gov/download/peptide_library/libraries/human/ION_TRAP/2014_05_29/md5_checklist.chk|Download]] | 
</WRAP>

  * Total number of Spectra: **340,356**
  * Unique Peptide Sequences: **207,910**
  * Total Proteins in FASTA file used: **60,384**
  * Proteome Coverage: **22.31%**


{{page>pepcopyright}}