peptidew:lib:bsa_it

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peptidew:lib:bsa_it [2018/08/07 15:57] (current)
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 +====== ​ BSA Ion Trap Library ======
 +=====  April 01, 2011 =====
 +
 +The Bovine Serum Albumin library was created from data generated at the NIST Mass Spectrometry Data Center.
 +
 +{{page>​peptidew:​lib:​newfiles_warning}}
 +
 +<WRAP center group 90%>
 +^ File - Description ^ Size ^ Link ^
 +| **2011_04_01_bsa_consensus_final_true_lib.tar.gz** - Consensus library in plain ASCII text (msp format). This format can be used as an exchange format. It is also directly readable by some software applications,​ including Skyline, after unzipping. |  1.2MB | [[ftp://​chemdata.nist.gov/​download/​peptide_library/​libraries/​proteins/​ion_trap/​bsa/​strict/​2011_04_01/​2011_04_01_bsa_consensus_final_true_lib.tar.gz|Download]] | 
 +| **2011_04_01_bsa_nist.tar.gz** - Consensus library in NIST binary format. The folder generated by extracting this package can be used directly by [[peptidew:​mspepsearch|MS Search or MSPepSearch]] and by the MSPepSearch node within Proteome Discoverer. |  2.6MB | [[ftp://​chemdata.nist.gov/​download/​peptide_library/​libraries/​proteins/​ion_trap/​bsa/​strict/​2011_04_01/​2011_04_01_bsa_nist.tar.gz|Download]] | 
 +| **2011_04_01_bsa_spectrast.tar.gz** - Consensus library in SpectraST format. ​ These library files can be directly searched by SpectraST after the package is extracted. |  2.9MB | [[ftp://​chemdata.nist.gov/​download/​peptide_library/​libraries/​proteins/​ion_trap/​bsa/​strict/​2011_04_01/​2011_04_01_bsa_spectrast.tar.gz|Download]] |
 +| **bsa_fasta.tar.gz** - FASTA file used to create the library. |  1KB | [[ftp://​chemdata.nist.gov/​download/​peptide_library/​libraries/​proteins/​ion_trap/​bsa/​strict/​2011_04_01/​bsa_fasta.tar.gz|Download]] |
 +| **README.txt** - Readme file.| ​ 4MB |[[ftp://​chemdata.nist.gov/​download/​peptide_library/​libraries/​proteins/​ion_trap/​bsa/​strict/​2011_04_01/​README.txt|Download]]|
 +| **md5_checklist.chk** - MD5 hash file. |  1KB | [[ftp://​chemdata.nist.gov/​download/​peptide_library/​libraries/​proteins/​ion_trap/​bsa/​strict/​2011_04_01/​md5_checklist.chk|Download]] | 
 + 
 +</​WRAP>​
 +
 +  * Total number of Spectra: **725**
 +  * Unique Peptide Sequences: **336**
 +  * Total Proteins in FASTA file used: **1**
 +  * Proteome Coverage: **94.56%**
 +
 +{{page>​pepcopyright}}
  
peptidew/lib/bsa_it.txt ยท Last modified: 2018/08/07 15:57 (external edit)