peptidew:lib:hsa_it

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peptidew:lib:hsa_it [2018/01/30 16:38] (current)
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 +====== Single Protein Library: The Human Serum Albumin ​ ======
 +=====  April 22, 2014 =====
 +
 +Over 3,000 CID tandem spectra for the human serum albumin (HAS) library was created from data generated at the NIST Mass Spectrometry Data Center. \\
 +
 +The library is available in two formats. Unzip after downloading. ​
 +
 +//​Reference:​ Mol. Cell. Proteomics 2014, 13 (9), 2435−49; doi: 10.1074/​mcp.O113.037135. . Tandem mass spectral libraries of peptides in digests of individual proteins: Human Serum Albumin (HSA). ​ Dong Q, Yan X, Kilpatrick LE, Liang Y, Mirokhin YA, Roth JS, Rudnick PA, Stein SE
 +//
 +
 +
 +<WRAP center group 90%>
 +^ File - Description ^ Size ^ Link ^
 +| **NIST14_Peptide_HSA_Library.zip** - ZIP Archive for Installation of Windows Database Program and Library. ​ The folder generated by extracting this package can be used directly by [[peptidew:​mspepsearch|MS Search or MSPepSearch]] and by the MSPepSearch node within Proteome Discoverer.| ​ ~19MB | [[ftp://​chemdata.nist.gov/​download/​peptide_library/​2014/​NIST14_Peptide_HSA_Library.zip|Download]] | 
 +| **hsa20140422.zip** - ZIP Archive with Library. Consensus library in plain ASCII text (msp format). This format can be used as an exchange format. It is also directly readable by some software applications,​ including Skyline, after unzipping. (.MSP text format) . |  ~6MB | [[ftp://​chemdata.nist.gov/​download/​peptide_library/​2014/​hsa20140422.zip|Download]] | 
 +| **md5_checklist.chk** - MD5 hash file. |  1KB | [[ftp://​chemdata.nist.gov/​download/​peptide_library/​2014/​md5_checklist.chk|Download]] |
 +
 +</​WRAP>​
 +
 +  * Total number of Spectra: **3040**
 +  * Unique Peptides: **2073**
 +  * Sequence Coverage: **100%**
 +
 +----
 +
 +To install the Database Program and Library after downloading and unzipping, click on //​NIST14_Peptide_HSA_Library.exe//​ and then follow instructions.
 +
 +MS1 Statistics for HSA Peptide Identifications is available ​ {{:​peptidew:​HSASingleProteinLibrary_MS1DataAnalysis.pdf|here}}.
 +
 +Additional documentation for NIST peptide libraries is {{:​peptidew:​nist_peplib_6_14.pdf|here}}.
 +
 +For more installation details {{:​peptidew:​readme_hsa.pdf|readme}}
 +
 +{{page>​pepcopyright}}
  
peptidew/lib/hsa_it.txt · Last modified: 2018/01/30 16:38 (external edit)