peptidew:lib:human20130605

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peptidew:lib:human20130605 [2014/06/25 16:22] (current)
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 +====== Human Ion Trap Library ( June 05, 2013) ======
 +
 +<WRAP center group 80%>
 +^ File - Description ^ Size ^ Link ^
 +| **2013_06_05_human_consensus_final_true_lib.tar.gz** - Consensus library in plain ASCII text (msp format). This format can be used as an exchange format. It is also directly readable by some software applications. | 647MB | [[ftp://​chemdata.nist.gov/​download/​peptide_library/​libraries/​human/​ION_TRAP/​2013_06_05/​2013_06_05_human_consensus_final_true_lib.tar.gz|Download]] | 
 +| **2013_06_05_human_nist.tar.gz** - Consensus library in NIST binary format. The folder generated by extracting this package can be used directly by [[peptidew:​mspepsearch|MS Search or MSPepSearch]]. | 1,171MB | [[ftp://​chemdata.nist.gov/​download/​peptide_library/​libraries/​human/​ION_TRAP/​2013_06_05/​2013_06_05_human_nist.tar.gz|Download]] | 
 +| **2013_06_05_human_spectrast.tar.gz** - Consensus library in SpectraST format. ​ These library files can be directly searched by SpectraST after the package is extracted. | 1,523MB | [[ftp://​chemdata.nist.gov/​download/​peptide_library/​libraries/​human/​ION_TRAP/​2013_06_05/​2013_06_05_human_spectrast.tar.gz|Download]] |
 +| **human_fasta.tar.gz** - FASTA file used to create the library. | 14MB | [[ftp://​chemdata.nist.gov/​download/​peptide_library/​libraries/​human/​ION_TRAP/​2013_06_05/​human_fasta.tar.gz|Download]] | 
 +</​WRAP>​
 +
 +  * Total number of Spectra: **328,791**
 +  * Unique Peptide Sequences: **199,286**
 +  * Total Proteins in FASTA file used: **60,384**
 +  * Proteome Coverage: **21.27%**
 +
 +{{page>​pepcopyright}}
  
peptidew/lib/human20130605.txt ยท Last modified: 2014/06/25 16:22 (external edit)