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— chemdata:nistlibs [2026/05/29 09:58] (current)
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 +<fs 200%>** NIST Libraries and Software **</fs> \\
 +<wrap right>DOI: [[http://dx.doi.org/10.18434/T4H594|10.18434/T4H594]]</wrap> \\
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 + \\
 +=== NIST EI Demo Search Software (2017) ===
 +New software and demo library can be found here:
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 +{{:chemdata:nist17:nist17demo.zip|Download installation program}} \\
 +{{:chemdata:nist17:nistms_ver23man.pdf|Download manual (PDF)}}
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 +
 +=== NIST Tandem Demo Search Software (2026) ===
 +Search software demo for tandem libraries can be downloaded from link below. Read more [[:tandem_search_program_demo|here]]
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 +{{ :chemdata:nist_ms_search_4.0_demo.zip |NIST MS Tandem Search Program (166MB)}}
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 +
 +
 +=== MS Interpreter Ver. 3.4.5  ===
 +(March 2023 Release)
 +
 +MS Interpreter [[chemdata:interpreter|(read more...)]] is a tool that enables the analysis of mass spectra based on the chemical structure of the underlying compound and the chemical formulas of its fragment ions. Now works for high and low mass accuracy spectra.  
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 +{{:chemdata:downloads:mspcalc2023.zip |Download Ver. 3.4.5 (2023 Release) }}
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 +
 +=== AMDIS ver. 2.73 ===
 +AMDIS - computer program that extracts spectra for individual components in a GC/MS data file. More information, links to downloads can be found here: 
 +[[:chemdata:amdis|AMDIS]]
 + \\
 +
 +=== MS PepSearch ===
 +
 +This MS PepSearch program  was developed for batch processing of both proteomics and metabolomics data, in which hundreds or thousands of unknown tandem mass spectra can be processed in a single run. More information, links to downloads can be found here: [[peptidew:mspepsearch|MS PepSearch]] \\
 +
 +=== Lib2NIST Library Conversion Tool ===
 +
 +Lib2NIST is tool for building and format conversion of NIST MS libraries. More information, links to downloads can be found here: [[:library_builder|Lib2Nist]]
 + \\
 + 
 +=== Glycan and Glycopeptides ===
 +  * Glycopeptide Mass Spectral Library (HCD) of Human IgG1 mAb Drugs \\ available for  {{:chemdata:nist17:nist_igg_glycopeptide.zip|download}}
 +  * Glycan library can be downloaded from [[chemdata:glycan-library|here]] 
 +  * Online access to Glycan Library is also [[https://chemdata.nist.gov/glycan|available]]
 +  
 +=== Annotated Recurrent Unidentified Spectra (ARUS ) ===
 +
 +  * [[chemdata:nist17:gcms_arus| 3 GC/MS Libraries]]  available for download (readable by NISTMS EI software).
 +  * We have provided [[chemdata:arus| 8 library files]] of recurring tandem mass spectra found in NIST Human Plasma/Serum and Urine reference materials that may have not been identified by NIST libraries, most of which are partly identified using NIST Hybrid Search methods (readable by NISTMS MS/MS software).
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 +==== Libraries Cited in Publications ====
 +
 +  * **MS Library of Oligosaccharides in NIST Human Milk SRM 1953** \\ (readable by NISTMS MS/MS software) \\ Creating a Mass Spectral Reference Library for Oligosaccharides in Human Milk \\ C.A. Remoroza et al., 2018 \\ [[https://DOI: 10.1021/acs.analchem.8b01176]] \\ <wrap round download 20%>[[peptidew:lib:nonhumanmilk|Read more and download...>]]</wrap>
 +
 +  * **A Mass Spectral Library of Acylcarnitines Derived from Human Urine** \\ (readable by NISTMS MS/MS software) \\ Xinjian Yan et al., 2020 \\ [[https://doi.org/10.1021/acs.analchem.0c00129]] \\ <wrap round download 20%>[[peptidew:lib:acylcarnitine|Read more and download...>]]</wrap>
 +
 +  * **MS Library of Free Oligosaccharides in Milk from a Variety of Mammals** \\ (readable by NISTMS MS/MS software) \\ Increasing the Coverage of a Mass Spectral Library of Milk Oligosaccharides using a Hybrid-search-based Bootstrapping Method and Milks from a Wide Variety of Mammals \\ C.A. Remoroza et al., 2020 \\ [[https://doi.org/10.1021/acs.analchem.0c00342]] \\ <wrap round download 20%>[[peptidew:lib:oligosaccarides|Read more and download...>]]</wrap>
 +
 +  * **Glycopeptide Abundance Distribution Spectra (GADS) Software and Libraries** \\ Representing and Comparing Site-Specific Glycan Abundance Distributions of Glycoproteins \\ C.A. Remoroza  et al., 2021 \\ https://pubs.acs.org/doi/10.1021/acs.jproteome.1c00442 \\ <wrap round download 20%>[[peptidew:nistmsgads|Read more and download...>]]</wrap>
 +  
 +  * **Libraries of Human Milk Glycopeptides** \\ Mass Spectra Library-Based Methods for Analysis of Site-specific N-Glycosylation Applied to Human Milk Proteins. \\ C.A. Remoroza et al., 2022 \\ [[https://doi.org/10.1021/acs.jproteome.1c00442]] \\ <wrap round download 20%>[[peptidew:human_n_linked_glyco|Read more and download...>]]</wrap>
 +
 +  * **SARS-CoV-2 Spike Protein Glycopeptides** \\ Determining Site-Specific Glycan Profiles of Recombinant SARS-CoV-2 Spike Proteins from Multiple Sources. \\ M.C. Burke et al., 2023 \\ [[https://pubs.acs.org/doi/full/10.1021/acs.jproteome.3c00271]] \\ <wrap round download>[[peptidew:sars-cov-2_spike_protein_n_linked_glyco|Read more and download...>]]</wrap>
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