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chemdata:start [2020/01/03 14:51]
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chemdata:start [2026/05/27 16:27] (current)
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| | ~~NOTOC~~ |
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| | <WRAP teal center round centeralign 90%><WRAP white center centeralign round 90%> |
| | <fs 200%>** Libraries, Tools, Service **</fs> |
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| | {{:chemdata:msdatacenter_ani.gif?nolink& }}This site provides information and access to NIST mass spectral data products. A variety of data products are available, including EI and tandem MS libraries (small molecule and peptide), a GC retention index collection as well as certain freely available, specialized spectral libraries. Freely available data analysis tools include AMDIS (Automated Mass Spectral Deconvolution and Identification System for GC/MS), the Mass Spectrum Interpreter (connects chemical structures with mass spectra), and the Mass Spectral Digitizer Program. Also available is a fully functional, version of NIST MS Search Program v.2.3 with a small demonstration library. |
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| | ===== Libraries ===== |
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| | * <color red>**Just Released**</color> - **2026 Versions of our EI, Tandem & RI Libraries & Software** |
| | * {{:chemdata:asms2026:nist26_flyers_ei.pdf|Electron Ionization (EI)}}, {{:chemdata:asms2026:nist26_flyers_tandem.pdf|Tandem (MS/MS)}} |
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| | * **Distributors**: NIST Databases are available only through [[:chemdata:distributors|Distributors]] |
| | * [[:chemdata:nistlibs|NIST Libraries and software]] - For Users of NIST Libraries and Software |
| | * [[https://peptide.nist.gov/|NIST Peptide MS Libraries]] – Nearly 3.8 million MS/MS Spectra for multiple biological species |
| | * [[:chemdata:msms|NIST Tandem MS Library]]- Library of tandem mass spectra for both ion-trap and variable-energy collision cell fragmentation |
| | * [[:chemdata:ridatabase|NIST GC Method / Retention Index MS Library]]- Extensive collection of GC retention indices with method information |
| | * [[https://chemdata.nist.gov/srmd-1953-glycan|On-Line Milk SRM/D 1953 Tandem MS library]] - Web version of the SRM/D 1953 Library. |
| | * [[https://chemdata.nist.gov/glycan/|On-Line Glycan MS/MS Library]] - Web version of the NIST Glycan Mass Spectral Reference Library |
| | * [[:chemdata:epatandem-library|EPA Tandem Mass Spectrometry Library]] – Starter library of environmentally relevant compounds |
| | * [[:chemdata:dart-library|DART Forensics Library]] – A library of in-source fragmentation spectra of DART-generated ions |
| | * [[:chemdata:glycan-library|Glycan MS/MS Library]] – A library of 209 glycans (includes MS Search software and 16,421 glycan spectra extracted from the NIST Tandem Library) |
| | * [[:chemdata:arus|ARUS]] - Annotated Recurrent Unidentified Spectra (ARUS ) Libraries for Analysis |
| | * [[:chemdata:polymersearch|NIST-Polymer Pyrolysis Search]] – An R shiny app and library to search pyrolysis GCMS data |
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| | ===== Tools ===== |
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| | * [[:chemdata:interpreter|Mass Spectrum Interpreter]] 2023 Release (v.3.4.5). Information and downloads for version 3.4 of this program which connects mass spectral peaks to their probable chemical structure origin (EI and MS/MS, both nominal and accurate mass). |
| | * [[:chemdata:nistlibs|NIST MS Software and Data]] - updates, demo, documentation, MSPepSearch, Lib2NIST, RUS libraries and support programs. |
| | * [[:chemdata:amdis|AMDIS]] – computer program that extracts spectra for individual components in a GC/MS data file (Instructions for using AMDIS with MS Search – 11-25-2019 Release |
| | * [[:chemdata:digitizer|Mass Spectrum Digitizer Program]] – a tutorial on how to use the program (includes program download) that allows the digitization of graphical spectra |
| | * [[:chemdata:glycocalc|The NIST Glyco Mass Calculator]] - a tool to aid in the analysis of glycoforms |
| | * [[:chemdata:dimedr|DIMEDR]] - A Novel Algorithm for Agglomerating Incongruent LC-MS Metabolomics Datasets. |
| | * [[peptidew:ms_piano|MS_Piano]] (New, 2021) - A new software tool for annotating peaks in collision induced dissociation (CID) tandem mass spectra of peptides and N-glycopeptides. |
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| | ===== Other Products and Services ===== |
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| | * Where to Get NIST Databases. Databases are available only through [[:chemdata:distributors|Distributors]] |
| | * [[http://www.nist.gov/mml/bmd/data/index.cfm|Mass Spectrometry Data Center]] – NIST home page of the group responsible for this site |
| | * [[http://webbook.nist.gov/chemistry/|NIST Chemistry WebBook]] – site with a diverse collection of data including electron ionization (EI) mass spectra |
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| | ===== Interlaboratory Study ===== |
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| | * [[:chemdata:glyco_call|Glycans from IgG]] |
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