User Tools

Differences

This shows you the differences between two versions of the page.


—peptidew:lib:zebrafish20150109 [2021/07/09 02:45] (current) – created - external edit 127.0.0.1
Line 1: Line 1:
 +====== Zebrafish Ion Trap Library ======
 +===== January 09, 2015 =====
 + 
 +<WRAP center group 80%>
 +All data in this library was analyzed on a Bruker HCT and donated by **Magnus Palmblad**, 
 +Associate Professor, Center for Proteomics and Metabolomics, Leiden University Medical Center,
 +P.O. Box 9600, Zone L04-Q, 2300 RC Leiden, The Netherlands \\ 
 +\\
  
 +<wrap lo>//__J Proteome Res.__ 2014 Mar 7;13(3):1537-44. doi: 10.1021/pr4010585. Epub 2014 Feb 5.
 +Identifying proteins in zebrafish embryos using spectral libraries generated from dissected adult organs and tissues. van der Plas-Duivesteijn SJ1, Mohammed Y, Dalebout H, Meijer A, Botermans A, Hoogendijk JL, Henneman AA, Deelder AM, Spaink HP, Palmblad M.
 +//</wrap>
 +</WRAP>
 +
 +{{page>peptidew:lib:newfiles_warning}}
 +
 +<WRAP center group 90%>
 +^ File - Description ^ Size ^ Link ^
 +| **2015_01_09_zebrafish_it_consensus_final_true_lib.tar.gz** - Consensus library in plain ASCII text (msp format). This format can be used as an exchange format. It is also directly readable by some software applications, including Skyline, after unzipping. |  37.2MB| [[https://chemdata.nist.gov/download/peptide_library/libraries/zebrafish/ION_TRAP/2015_01_09_zebrafish_it_consensus_final_true_lib.tar.gz|Download]] |
 +| **2015_01_09_zebrafish_nist.tar.gz** - Consensus library in NIST binary format. The folder generated by extracting this package can be used directly by [[peptidew:mspepsearch|MS Search or MSPepSearch]] and by the MSPepSearch node within Proteome Discoverer. |  75.6MB| [[https://chemdata.nist.gov/download/peptide_library/libraries/zebrafish/ION_TRAP/2015_01_09_zebrafish_nist.tar.gz|Download]] | 
 +| **md5_checklist.chk** - MD5 hash file. |  1KB| [[https://chemdata.nist.gov/download/peptide_library/libraries/zebrafish/ION_TRAP/md5_checklist.chk|Download]] | 
 +</WRAP>
 +
 +  * Total number of Spectra: **28,952**
 +  * Unique Peptide Sequences: **21,242**
 +
 +
 +{{page>pepcopyright}}

This website uses cookies. By using the website, you agree with storing cookies on your computer. Also, you acknowledge that you have read and understand our Privacy Policy. If you do not agree, please leave the website.

More information