Zebrafish Ion Trap Library

January 09, 2015

All data in this library was analyzed on a Bruker HCT and donated by Magnus Palmblad, Associate Professor, Center for Proteomics and Metabolomics, Leiden University Medical Center, P.O. Box 9600, Zone L04-Q, 2300 RC Leiden, The Netherlands

J Proteome Res. 2014 Mar 7;13(3):1537-44. doi: 10.1021/pr4010585. Epub 2014 Feb 5. Identifying proteins in zebrafish embryos using spectral libraries generated from dissected adult organs and tissues. van der Plas-Duivesteijn SJ1, Mohammed Y, Dalebout H, Meijer A, Botermans A, Hoogendijk JL, Henneman AA, Deelder AM, Spaink HP, Palmblad M.

The libraries in the msp and NIST binary formats were updated on July 25, 2018. Previous versions of these files are available on request.

File - Description Size Link
2015_01_09_zebrafish_it_consensus_final_true_lib.tar.gz - Consensus library in plain ASCII text (msp format). This format can be used as an exchange format. It is also directly readable by some software applications, including Skyline, after unzipping. 37.2MB Download
2015_01_09_zebrafish_nist.tar.gz - Consensus library in NIST binary format. The folder generated by extracting this package can be used directly by MS Search or MSPepSearch and by the MSPepSearch node within Proteome Discoverer. 75.6MB Download
md5_checklist.chk - MD5 hash file. 1KB Download
  • Total number of Spectra: 28,952
  • Unique Peptide Sequences: 21,242

© Copyright information
These mass spectral libraries are protected by copyright law and may not be re-distributed without a valid Distribution Agreement. To receive such an agreement, contact the Standard Reference Data Program at the National Institute of Standards and Technology by emailing or calling 301-975-2008.

peptidew/lib/zebrafish20150109.txt · Last modified: 2021/07/08 22:45 (external edit)

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