The human HCD library was created entirely from raw data stored on the Clinical Proteomic Tumor Analysis Consortium (CPTAC) data portal https://cptac-data-portal.georgetown.edu/cptacPublic/. This library was compiled from data contributed by the University of North Carolina from the analysis of human tumor-mouse xenograft tissues.
| File - Description | Size | Link |
|---|---|---|
| cptac2_human_hcd_selected.msp.tar.gz - Consensus library in plain ASCII text (msp format). This format can be used as an exchange format. It is also directly readable by some software applications, including Skyline, after unzipping. | 590MB | Download |
| cptac2_human_hcd_selected.tar.gz - Consensus library in NIST binary format. The folder generated by extracting this package can be used directly by MS Search or MSPepSearch and by the MSPepSearch node within Proteome Discoverer. | 1.0GB | Download |
| 20111201-RefSeq-Human-37-Mouse-37-Trypsin.fasta.tar.gz - FASTA file used to search CompRef human-mouse xenograft samples. | 16.2MB | Download |
| md5_checklist.chk - MD5 hash file. | 1KB | Download |
* Total number of Spectra: 183,140
* Unique Peptide Sequences: 92,409
* Total Proteins in FASTA file used: 62,417