peptidew:lib:humanhcd20160503

Human HCD Library

September 23, 2016

The human HCD library was created from data available on public repositories ( CPTAC and ProteomeXchange)

File - Description Size Link
human_hcd_selected.msp.tar.gz - Library of selected spectra in plain ASCII text (msp format). This format can be used as an exchange format. It is also directly readable by some software applications, like Skyline, after unzipping. 2.2GB Download
human_hcd_selected_part1.tar.gz - First part of the Library of selected spectra in NIST binary format. The folder generated by extracting this package can be used directly by MS Search or MSPepSearch and by the MSPepSearch node within Proteome Discoverer. 5.1GB Download
human_hcd_selected_part2.tar.gz - Second part of the Library of selected spectra in NIST binary format. The folder generated by extracting this package can be used directly by MS Search or MSPepSearch and by the MSPepSearch node within Proteome Discoverer. 379MB Download
human_fasta.tar.gz - FASTA file used to create the library. 15MB Download
md5_checklist.chk - MD5 hash file. 1KB Download
  • Total number of Spectra: 1,127,971
  • Unique Peptide Sequences: 320,824
  • Total Proteins in FASTA file used: 60,384
  • Proteome Coverage: 27.51%

© Copyright information
These peptide mass spectral libraries are protected by copyright law and may not be re-distributed without a valid Distribution Agreement. To receive such an agreement, contact the Standard Reference Data Program at the National Institute of Standards and Technology by emailing data@nist.gov or calling 301-975-2008.

peptidew/lib/humanhcd20160503.txt · Last modified: 2016/09/23 11:19 (external edit)

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